Data source name | USDA6 |
Full name |
Bradyrhizobium japonicum USDA 6 ![]() |
Taxonomy Lineage | Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium. |
Data source name | USDA6 |
Full name |
Bradyrhizobium japonicum USDA 6 ![]() |
Taxonomy Lineage | Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium. |
Chromosomes |
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Features | FeaturesView : 0 features |
List | GenesView csv txt FAA |
Geneset | GenesetView |
Function category | GeneCategoryView csv txt |
Annotation | Gene Annotation WordCloudView |
Proteome | |
Interactome | |
Transcriptome | |
Bibliome |
References
from
Kazusa GeneIndexing articles ![]() |
Data dowonload |
Distribution of Sequence and Annotated Data Files (FTP) ![]() |
Sequence data |
INSDB DNA DataBank FlatFiles ![]() |
Social genome annotation | |
DAS service |
DAS/1.53 - entry_points 1.0
![]() |
NCBI Taxonomy |
Taxonomy ID: 1037409 ![]() |
KEGG GENOME | bju ![]() |
UniProt |
taxonomy:1037409 in UniProt ![]() |
Genomes Chromosomes/Plasmids |
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Genes |
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Protein sequences | /rhizobase/USDA6/genes.faa -- AminoAcids sequence in Fasta format. | ||||||||||||||||||||||||
Nucleotide sequences | |||||||||||||||||||||||||
Gene symbols | /rhizobase/USDA6/genes/search/dsn/gene_symbol.txt (File format) | ||||||||||||||||||||||||
GeneIndex gnames | /rhizobase/USDA6/genes/search/dsn/gi_gname.txt (File format) | ||||||||||||||||||||||||
Gene function category |
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Gene annotation word clouds |
/rhizobase/USDA6/genes/word_cloud.txt -- tab delimitered text format. File format:
/rhizobase/USDA6/genes/word_cloud?c=10 -- 10 counts cut-off in html. | ||||||||||||||||||||||||
GO Terms by ipr2go | /api/rhizobase/USDA6/genes/goterm.txt (File format) | ||||||||||||||||||||||||
InterProScan matches | /api/rhizobase/USDA6/genes/interpro.txt (File format) |