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rhizobase » Mesorhizobium loti MAFF303099 » genes » mll5320

GeneView: mll5320

GFF3
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GeneAnnotation

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ID mll5320
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
Gene product

virulence factor MviN-like protein

Gene productExtracted from literature
Functional category Symbiosis
Gene Ontology
[IEA]
ipr2go

Genomic context

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Location Chr:4246348..4247928 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length1581 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length526 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Mesorhizobium:mll5320
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
 FromToLength(A.A.)
Transmembrane segments 91 113 22
128 150 22
158 180 22
192 214 22
233 255 22
275 297 22
315 337 22
355 377 22
385 407 22
413 434 21
449 471 22
480 502 22

Mutants

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Protein-Protein Interaction experiments

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Sato2007

PMID:18000013

Homology search results (Blast2)

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RhizoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG mll5320 External -- Phylogenetic classification of ortholog.
  • MBGD mlo:mll5320 External -- The automated construction of orthologous groups.
  • Gclust *mll5320* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

RhizoBase

Kazusa DNA Research Institute

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