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rhizobase » Mesorhizobium loti MAFF303099 » genes » mll0207

GeneView: mll0207

GFF3
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GeneAnnotation

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ID mll0207
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
Gene product

unknown protein

Gene productExtracted from literature
Functional category No similarity
Gene Ontology
[IEA]
ipr2go
  • Molecular Function: 3-dehydroquinate dehydratase activity (GO:0003855 External)

Genomic context

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Location Chr:139487..139921 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length435 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length144 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Mesorhizobium:mll0207
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
 FromToLength(A.A.)
Transmembrane segments 116 138 22

Mutants

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Protein-Protein Interaction experiments

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Sato2007

PMID:18000013

Homology search results (Blast2)

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RhizoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG mll0207 External -- Phylogenetic classification of ortholog.
  • MBGD mlo:mll0207 External -- The automated construction of orthologous groups.
  • Gclust *mll0207* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

RhizoBase

Kazusa DNA Research Institute

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