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cyanobase » Synechocystis sp. PCC 6803 » genes » sll0043

GeneView: sll0043

GFF3
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GeneAnnotation

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ID sll0043
Type protein_coding_gene
Gene symbol
pixL, taxAY1, hik18
Gene symbolExtracted from literature
cheA, pixL, taxAY1, hik18, taxAY, sll0043
Gene product

positive phototaxis protein, homologous to chemotaxis protein CheA, two-component hybrid histidine kinase

Gene productExtracted from literature
CheA-like PixL, Sll0043, Hybrid histidine kinase, Chy18, PixL, TaxAY1, Hik18
Functional category Regulatory functions
Gene Ontology
[IEA]
ipr2go
  • Biological Process: chemotaxis (GO:0006935 External)
  • Biological Process: peptidyl-histidine phosphorylation (GO:0018106 External)
  • Biological Process: phosphorylation (GO:0016310 External)
  • Biological Process: regulation of transcription, DNA-dependent (GO:0006355 External)
  • Biological Process: signal transduction (GO:0007165 External)
  • Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160 External)
  • Cellular Component: cytoplasm (GO:0005737 External)
  • Cellular Component: intracellular (GO:0005622 External)
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: protein histidine kinase activity (GO:0004673 External)
  • Molecular Function: signal transducer activity (GO:0004871 External)
  • Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772 External)
  • Molecular Function: two-component response regulator activity (GO:0000156 External)
  • Molecular Function: two-component sensor activity (GO:0000155 External)

Genomic context

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Location Chr:3144213..3148421 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length4209 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length1402 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Synechocystis:sll0043
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
Not detected.

Mutants

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Protein-Protein Interaction experiments

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Sato2007

PMID:18000013

Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG sll0043 External -- Phylogenetic classification of ortholog.
  • MBGD syn:sll0043 External -- The automated construction of orthologous groups.
  • Gclust *sll0043* External -- trans-kingdom classification of proteins.
Phenotype database
  • Fluorome sll0043 External -- The Cyanobacterial Chlorophyll Fluorescence Database.

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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