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cyanobase » Synechococcus elongatus PCC 7942 » genes » Synpcc7942_1357

GeneView: Synpcc7942_1357

GFF3
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GeneAnnotation

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ID Synpcc7942_1357
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
Gene product

multi-sensor signal transduction histidine kinase

Gene productExtracted from literature
Synpcc7942_1357
Functional category Signal transduction mechanisms
Gene Ontology
[IEA]
ipr2go
  • Biological Process: peptidyl-histidine phosphorylation (GO:0018106 External)
  • Biological Process: phosphorylation (GO:0016310 External)
  • Biological Process: regulation of transcription, DNA-dependent (GO:0006355 External)
  • Biological Process: signal transduction (GO:0007165 External)
  • Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160 External)
  • Cellular Component: membrane (GO:0016020 External)
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: protein histidine kinase activity (GO:0004673 External)
  • Molecular Function: signal transducer activity (GO:0004871 External)
  • Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772 External)
  • Molecular Function: two-component sensor activity (GO:0000155 External)

Genomic context

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Location Chr:1391347..1396770 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length5424 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length1807 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Synpcc7942:synpcc7942_1357
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
 FromToLength(A.A.)
Transmembrane segments 10 32 22
41 63 22
72 94 22
104 126 22
138 160 22
171 193 22
204 226 22
445 467 22

Mutants

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Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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