Sign in
cyanobase » Synechococcus sp. PCC 7002 » genes » SYNPCC7002_A1384

GeneView: SYNPCC7002_A1384

GFF3
Sign in

GeneAnnotation

? | +/- | Top
ID SYNPCC7002_A1384
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
Gene product

sensory transduction histidine kinase

Gene productExtracted from literature
Functional category Regulatory functions
Gene Ontology
[IEA]
ipr2go
  • Biological Process: peptidyl-histidine phosphorylation (GO:0018106 External)
  • Biological Process: phosphorylation (GO:0016310 External)
  • Biological Process: protein-chromophore linkage (GO:0018298 External)
  • Biological Process: regulation of transcription (GO:0045449 External)
  • Biological Process: sensory perception (GO:0007600 External)
  • Biological Process: signal transduction (GO:0007165 External)
  • Cellular Component: membrane (GO:0016020 External)
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: G-protein coupled photoreceptor activity (GO:0008020 External)
  • Molecular Function: protein histidine kinase activity (GO:0004673 External)
  • Molecular Function: signal transducer activity (GO:0004871 External)
  • Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772 External)
  • Molecular Function: two-component sensor activity (GO:0000155 External)

Genomic context

? | +/- | Top
Location Chr:1448359..1450362 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

? | +/- | Top
Nucleotide sequence
FNA
Length2004 nt
Sequence retrieving

Peptide

? | +/- | Top
Translated sequence
FAA
Length667 AA.

Protein families, domains and functional sites

? | +/- | Top
Graphical view by InterProScan External
show/hide
PNG
Synpcc7002:synpcc7002_a1384
Table view by InterProScan External
show/hide
TableView
GFF3
Transmembrane regions predicted by SOSUI
 FromToLength(A.A.)
Transmembrane segments 332 354 22
374 396 22

Mutants

? | +/- | Top

Homology search results (Blast2)

? | +/- | Top
show/hide TableView GFF3

CyanoBase Ortholog table (blast reciprocal best hit pairs)

? | +/- | Top
show/hide TableView GFF3

Geneset

? | +/- | Top

Variation

? | +/- | Top

References

? | +/- | Top

External links

? | +/- | Top
Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
Phenotype database

API

? | +/- | Top
Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

Licence and disclaimer