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cyanobase » Cyanothece sp. PCC 8801 » genes » PCC8801_0607

GeneView: PCC8801_0607

GFF3
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GeneAnnotation

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ID PCC8801_0607
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
Gene product

pyruvate phosphate dikinase PEP/pyruvate-binding

Gene productExtracted from literature
Functional category Carbohydrate transport and metabolism
Gene Ontology
[IEA]
ipr2go
  • Biological Process: phosphorylation (GO:0016310 External)
  • Cellular Component: plasma membrane (GO:0005886 External)
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: catalytic activity (GO:0003824 External)
  • Molecular Function: kinase activity (GO:0016301 External)
  • Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772 External)

Genomic context

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Location Chr:634606..637521 External
Strand direct
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length2916 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length971 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Pcc8801:pcc8801_0607
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
 FromToLength(A.A.)
Transmembrane segments 2 24 22
52 74 22
79 100 21
110 132 22
136 154 18
161 183 22

Mutants

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Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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