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cyanobase » Nostoc punctiforme ATCC 29133 » genes » Npun_R1865

GeneView: Npun_R1865

GFF3
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GeneAnnotation

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ID Npun_R1865
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
Gene product

dephospho-CoA kinase

Gene productExtracted from literature
Functional category Not in COGs
Gene Ontology
[IEA]
ipr2go
  • Biological Process: coenzyme A biosynthetic process (GO:0015937 External)
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: dephospho-CoA kinase activity (GO:0004140 External)

Genomic context

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Location Chr:2292055..2292651 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length597 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length198 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Npun:npun_r1865
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
Not detected.

Mutants

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Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
  • GTop :Npun_R1865 External -- Genomes TO Protein structures and functions.
Ortholog/paralog cluster databases
  • COG Npun_R1865 External -- Phylogenetic classification of ortholog.
  • MBGD npu:Npun_R1865 External -- The automated construction of orthologous groups.
  • Gclust *Npun_R1865* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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