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cyanobase » Chlorobium tepidum TLS » genes » CT0329

GeneView: CT0329

GFF3
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GeneAnnotation

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ID CT0329
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
Gene product

undecaprenol kinase, putative

Gene productExtracted from literature
Functional category Toxin production and resistance
Gene Ontology
[IEA]
ipr2go
  • Biological Process: dephosphorylation (GO:0016311 External)
  • Cellular Component: membrane (GO:0016020 External)
  • Molecular Function: undecaprenyl-diphosphatase activity (GO:0050380 External)

Genomic context

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Location Chr:345756..346604 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length849 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length282 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Chlorobium:ct0329
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
 FromToLength(A.A.)
Transmembrane segments 1 23 22
50 72 22
88 110 22
113 135 22
153 175 22
196 217 21
226 248 22
258 280 22

Mutants

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Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
  • GTop ctep0:CT0329 External -- Genomes TO Protein structures and functions.
Ortholog/paralog cluster databases
  • COG CT0329 External -- Phylogenetic classification of ortholog.
  • MBGD cte:CT0329 External -- The automated construction of orthologous groups.
  • Gclust *CT0329* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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