Sign in
cyanobase » Synechococcus sp. JA-2-3B'a(2-13) » genes » CYB_1184

GeneView: CYB_1184

GFF3
Sign in

GeneAnnotation

? | +/- | Top
ID CYB_1184
Type protein_coding_gene
Gene symbol
selD
Gene symbolExtracted from literature
Gene product

selenide, water dikinase

Gene productExtracted from literature
Functional category Amino acid transport and metabolism
Gene Ontology
[IEA]
ipr2go
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: catalytic activity (GO:0003824 External)
  • Molecular Function: catalytic activity (GO:0003824 External)
  • Molecular Function: selenide, water dikinase activity (GO:0004756 External)
  • Molecular Function: selenide, water dikinase activity (GO:0004756 External)

Genomic context

? | +/- | Top
Location Chr:1222137..1223204 External
Strand direct
Genomic context

GenomeView External

GenomeView (old) External

Transcript

? | +/- | Top
Nucleotide sequence
FNA
Length1068 nt
Sequence retrieving

Peptide

? | +/- | Top
Translated sequence
FAA
Length355 AA.

Protein families, domains and functional sites

? | +/- | Top
Graphical view by InterProScan External
show/hide
PNG
Cyb:cyb_1184
Table view by InterProScan External
show/hide
TableView
GFF3
Transmembrane regions predicted by SOSUI
Not detected.

Mutants

? | +/- | Top

Homology search results (Blast2)

? | +/- | Top
show/hide TableView GFF3

CyanoBase Ortholog table (blast reciprocal best hit pairs)

? | +/- | Top
show/hide TableView GFF3

Geneset

? | +/- | Top

Variation

? | +/- | Top

References

? | +/- | Top

External links

? | +/- | Top
Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG CYB_1184 External -- Phylogenetic classification of ortholog.
  • MBGD cyb:CYB_1184 External -- The automated construction of orthologous groups.
  • Gclust *CYB_1184* External -- trans-kingdom classification of proteins.
Phenotype database

API

? | +/- | Top
Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

Licence and disclaimer