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cyanobase » Cyanothece sp. PCC 7425 » genes » Cyan7425_1437

GeneView: Cyan7425_1437

GFF3
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GeneAnnotation

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ID Cyan7425_1437
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
Gene product

pentapeptide repeat protein

Gene productExtracted from literature
Functional category Function unknown
Gene Ontology
[IEA]
ipr2go

Genomic context

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Location Chr:1274198..1275433 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length1236 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length411 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Cyan7425:cyan7425_1437
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
 FromToLength(A.A.)
Transmembrane segments 55 77 22
96 118 22
140 162 22

Mutants

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Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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