Sign in
cyanobase » Cyanothece sp. ATCC 51142 » genes » cce_4060

GeneView: cce_4060

GFF3
Sign in

GeneAnnotation

? | +/- | Top
ID cce_4060
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
Gene product

serine/threonine protein kinase

Gene productExtracted from literature
Functional category Not in COGs
Gene Ontology
[IEA]
ipr2go
  • Biological Process: protein amino acid phosphorylation (GO:0006468 External)
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: protein kinase activity (GO:0004672 External)
  • Molecular Function: protein serine/threonine kinase activity (GO:0004674 External)

Genomic context

? | +/- | Top
Location Chr:4177978..4180062 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

? | +/- | Top
Nucleotide sequence
FNA
Length2085 nt
Sequence retrieving

Peptide

? | +/- | Top
Translated sequence
FAA
Length694 AA.

Protein families, domains and functional sites

? | +/- | Top
Graphical view by InterProScan External
show/hide
PNG
Cce:cce_4060
Table view by InterProScan External
show/hide
TableView
GFF3
Transmembrane regions predicted by SOSUI
Not detected.

Mutants

? | +/- | Top

Homology search results (Blast2)

? | +/- | Top
show/hide TableView GFF3

CyanoBase Ortholog table (blast reciprocal best hit pairs)

? | +/- | Top
show/hide TableView GFF3

Geneset

? | +/- | Top

Variation

? | +/- | Top

References

? | +/- | Top

External links

? | +/- | Top
Sequence databases
Gene annotation databases
Protein databases
3D structure databases
  • GTop :cce_4060 External -- Genomes TO Protein structures and functions.
Ortholog/paralog cluster databases
  • COG cce_4060 External -- Phylogenetic classification of ortholog.
  • MBGD cyt:cce_4060 External -- The automated construction of orthologous groups.
  • Gclust *cce_4060* External -- trans-kingdom classification of proteins.
Phenotype database

API

? | +/- | Top
Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

Licence and disclaimer