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cyanobase » Cyanothece sp. ATCC 51142 » genes » cce_0508

GeneView: cce_0508

GFF3
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GeneAnnotation

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ID cce_0508
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
Gene product

putative phosphoenolpyruvate carboxykinase (ATP)

Gene productExtracted from literature
Functional category Not in COGs
Gene Ontology
[IEA]
ipr2go
  • Biological Process: gluconeogenesis (GO:0006094 External)
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: phosphoenolpyruvate carboxykinase (ATP) activity (GO:0004612 External)
  • Molecular Function: phosphoenolpyruvate carboxykinase activity (GO:0004611 External)
  • Molecular Function: purine nucleotide binding (GO:0017076 External)

Genomic context

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Location Chr:506024..507733 External
Strand direct
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length1710 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length569 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Cce:cce_0508
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
Not detected.

Mutants

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Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
  • GTop :cce_0508 External -- Genomes TO Protein structures and functions.
Ortholog/paralog cluster databases
  • COG cce_0508 External -- Phylogenetic classification of ortholog.
  • MBGD cyt:cce_0508 External -- The automated construction of orthologous groups.
  • Gclust *cce_0508* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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