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cyanobase » Synechococcus sp. CC9311 » genes » sync_2593

GeneView: sync_2593

GFF3
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GeneAnnotation

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ID sync_2593
Type protein_coding_gene
Gene symbol
tmk
Gene symbolExtracted from literature
Gene product

thymidylate kinase

Gene productExtracted from literature
Functional category Nucleotide and nucleoside interconversions
Gene Ontology
[IEA]
ipr2go
  • Biological Process: dTDP biosynthetic process (GO:0006233 External)
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: thymidylate kinase activity (GO:0004798 External)

Genomic context

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Location Chr:2271932..2272570 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length639 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length212 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Cc9311:sync_2593
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
Not detected.

Mutants

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Homology search results (Blast2)

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show/hide TableView GFF3

CyanoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG sync_2593 External -- Phylogenetic classification of ortholog.
  • MBGD syg:sync_2593 External -- The automated construction of orthologous groups.
  • Gclust *sync_2593* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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