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cyanobase » Anabaena sp. PCC 7120 » genes » alr3402

GeneView: alr3402

GFF3
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GeneAnnotation

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ID alr3402
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
alr3402
Gene product

nucleoside diphosphate kinase

Gene productExtracted from literature
nucleoside diphosphate kinase
Functional category Interconversions and salvage of nucleosides and nucleotides
Gene Ontology
[IEA]
ipr2go
  • Biological Process: CTP biosynthetic process (GO:0006241 External)
  • Biological Process: GTP biosynthetic process (GO:0006183 External)
  • Biological Process: UTP biosynthetic process (GO:0006228 External)
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: nucleoside diphosphate kinase activity (GO:0004550 External)

Genomic context

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Location Chr:4113842..4114195 External
Strand direct
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length354 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length117 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Anabaena:alr3402
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
Not detected.

Mutants

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Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG alr3402 External -- Phylogenetic classification of ortholog.
  • MBGD ana:alr3402 External -- The automated construction of orthologous groups.
  • Gclust *alr3402* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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