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cyanobase » Anabaena sp. PCC 7120

Anabaena sp. PCC 7120


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Data source name Anabaena
Full name Anabaena sp. PCC 7120 External
Taxonomy Lineage Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc

Genome Information

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Name Size (bp) Genes
Anabaena-chr-chr Chromosome 6,413,771 5,437
Anabaena-alpha-alpha Alpha 408,101 386
Anabaena-beta-beta Beta 186,614 186
Anabaena-gamma-gamma Gamma 101,965 90
Anabaena-delta-delta Delta 55,414 88
Anabaena-epsilon-epsilon Epsilon 40,340 31
Anabaena-zeta-zeta Zeta 5,584 5
Total 7,211,789 6,223
Features FeaturesView : 0 features


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List GenesView csv txt FAA
Geneset GenesetView
Function category GeneCategoryView csv txt
Annotation Gene Annotation WordCloudView


Tools and analysis

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KazusaMart Dataset Anabaena

Genome-scale data

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Curated mutant information Genes and Mutants - as known as CyanoGenes/Mutants
Bibliome References from Kazusa GeneIndexing articles External


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References Bibliography of Anabaena sp. PCC 7120 genome project Feed-icon
Gene Indexing Kazusa GeneIndexing articles External Feed-icon


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Data dowonload Distribution of Sequence and Annotated Data Files (FTP) External
Sequence data INSDB DNA DataBank FlatFiles External
Social genome annotation
DAS service
NCBI Taxonomy Taxonomy ID: 103690 External
KEGG GENOME ana External
UniProt taxonomy:103690 in UniProt External


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Genomes Chromosomes/Plasmids
Genes File format:
ColumnDescription or example
1Data source nameSynechocystis
3Chromosome nameChr
4Start position7229
5End position8311
6Orientation+ or -
7Definitionphotosystem II D1 protein
Protein sequences /cyanobase/Anabaena/genes.faa -- AminoAcids sequence in Fasta format.
Nucleotide sequences
Gene symbols /cyanobase/Anabaena/genes/search/dsn/gene_symbol.txt (File format)
GeneIndex gnames /cyanobase/Anabaena/genes/search/dsn/gi_gname.txt (File format)
Gene function category File format:
ColumnDescription or example
1Gene IDsll0084
2Gene Deffinitionputative phosphatase
3First category IDA
4First category nameAmino acid biosynthesis
5Second category IDA1
6Second category nameAromatic amino acid family
Gene annotation word clouds /cyanobase/Anabaena/genes/word_cloud.txt -- tab delimitered text format.
File format:
ColumnDescription or example
/cyanobase/Anabaena/genes/word_cloud?style=plain -- Plain view in html
/cyanobase/Anabaena/genes/word_cloud?c=10 -- 10 counts cut-off in html.
GO Terms by ipr2go /api/cyanobase/Anabaena/genes/goterm.txt (File format)
InterProScan matches /api/cyanobase/Anabaena/genes/interpro.txt (File format)

Kazusa DNA Research Institute

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