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cyanobase » Anabaena variabilis ATCC 29413 » genes » Ava_B0009

GeneView: Ava_B0009

GFF3
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GeneAnnotation

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ID Ava_B0009
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
Gene product

Serine/Threonine protein kinase with TPR repeats

Gene productExtracted from literature
Functional category Not in COGs
Gene Ontology
[IEA]
ipr2go
  • Biological Process: protein amino acid phosphorylation (GO:0006468 External)
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: binding (GO:0005488 External)
  • Molecular Function: protein kinase activity (GO:0004672 External)
  • Molecular Function: protein serine/threonine kinase activity (GO:0004674 External)

Genomic context

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Location plasmid_A:12448..14310 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length1863 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length620 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Ava:ava_b0009
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
 FromToLength(A.A.)
Transmembrane segments 332 354 22

Mutants

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Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG Ava_B0009 External -- Phylogenetic classification of ortholog.
  • MBGD ava:Ava_B0009 External -- The automated construction of orthologous groups.
  • Gclust *Ava_B0009* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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