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cyanobase » Anabaena variabilis ATCC 29413 » genes » Ava_3633

GeneView: Ava_3633

GFF3
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GeneAnnotation

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ID Ava_3633
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
Gene product

Putative Anti-Sigma regulatory factor (Ser/Thr protein kinase)

Gene productExtracted from literature
Functional category Signal transduction mechanisms
Gene Ontology
[IEA]
ipr2go

Genomic context

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Location Chr:4528970..4529419 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length450 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length149 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Ava:ava_3633
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
 FromToLength(A.A.)
Transmembrane segments 14 36 22

Mutants

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Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG Ava_3633 External -- Phylogenetic classification of ortholog.
  • MBGD ava:Ava_3633 External -- The automated construction of orthologous groups.
  • Gclust *Ava_3633* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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